Gene detail information of Glyur005651s00044168 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24090.1 | 7.00E-11 | |
| NR | NP_001241068.1 | 6.30E-16 | uncharacterized protein LOC100803482 [Glycine max] |
| Swissprot | tr|Q0JBP5|LOGL6_ORYSJ | 3.00E-09 | Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 |
| trEMBL | tr|C6TML9|C6TML9_SOYBN | 2.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA0048S00250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05651 | 255 | 2960 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.290 |
| SRR1783600 | control | 0.187 |
| SRR1783602 | moderate drought stress | 0.207 |
| SRR1811619 | moderate drought stress | 0.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.488 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.449 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.165 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.744 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.178 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.185 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.275 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.603 |
| SRR2868004 | Drought Stress (root) | 0.465 |
| SRR2967015 | Control (root) | 0.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.205 |
| SRR9715740 | Leaf | 0.060 |
| SRR9715741 | Leaf | 0.145 |
| SRR9715739 | Root | 0.020 |
| SRR9715742 | Root | 0.005 |
| SRR9715743 | Root | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.432 |
| SRR8749028 | MeJA induced 9h | 1.782 |
| SRR8749029 | MeJA induced 9h | 0.453 |
| SRR8749030 | Uninduced | 0.148 |
| SRR8749031 | Uninduced | 0.065 |
| SRR8749032 | Uninduced | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.341 |
| SRR8400027 | Control - Root | 0.090 |