Gene detail information of Glyur005590s00047632.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31500.1 | 8.00E-26 | cytochrome P450, family 83, subfamily B, polypeptide 1 |
| NR | XP_006576430.1 | 5.20E-46 | PREDICTED: cytochrome P450 83B1-like [Glycine max] |
| Swissprot | tr|O81970|C71A9_SOYBN | 4.00E-30 | Cytochrome P450 71A9 |
| trEMBL | tr|I1JKT2|I1JKT2_SOYBN | 2.00E-46 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G03640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05590 | 7983 | 8414 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP83B1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005590s00047632.1 | PF00067.17 | p450 | 2 | 141 | 7.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.423 |
| SRR1783600 | control | 0.425 |
| SRR1783602 | moderate drought stress | 1.701 |
| SRR1811619 | moderate drought stress | 1.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.373 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.025 |
| SRR2868004 | Drought Stress (root) | 0.133 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.943 |
| SRR9715743 | Root | 0.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.138 |
| SRR8400027 | Control - Root | 0.233 |