Gene detail information of Glyur005530s00045302 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004497202.1 | 9.96E-10 | PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072W2E3|A0A072W2E3_MEDTR | 4.00E-09 | Transducin/WD-like repeat-protein {ECO:0000313|EMBL:KEH44400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05530 | 8209 | 8634 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.887 |
| SRR1783600 | control | 9.345 |
| SRR1783602 | moderate drought stress | 17.222 |
| SRR1811619 | moderate drought stress | 11.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.324 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.259 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.515 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.453 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.614 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.627 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.960 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.206 |
| SRR2868004 | Drought Stress (root) | 0.244 |
| SRR2967015 | Control (root) | 0.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.289 |
| SRR9715740 | Leaf | 2.881 |
| SRR9715741 | Leaf | 1.664 |
| SRR9715739 | Root | 4.110 |
| SRR9715742 | Root | 4.462 |
| SRR9715743 | Root | 2.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.019 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.136 |
| SRR8400027 | Control - Root | 8.097 |