Gene detail information of Glyur005510s00046347 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20740.1 | 8.00E-42 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | XP_004488124.1 | 9.90E-91 | PREDICTED: 21 kDa protein-like [Cicer arietinum] |
| Swissprot | tr|P17407|21KD_DAUCA | 9.00E-32 | 21 kDa protein (Precursor) |
| trEMBL | tr|V7AY87|V7AY87_PHAVU | 1.00E-85 | Uncharacterized protein {ECO:0000313|EMBL:ESW10617.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05510 | 4484 | 5083 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005510s00046347.1 | PF04043.10 | PMEI | 25 | 174 | 5.10E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.326 |
| SRR1783600 | control | 6.333 |
| SRR1783602 | moderate drought stress | 5.876 |
| SRR1811619 | moderate drought stress | 5.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.055 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.755 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.029 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.141 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.318 |
| SRR2868004 | Drought Stress (root) | 9.912 |
| SRR2967015 | Control (root) | 4.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.646 |
| SRR9715740 | Leaf | 1.605 |
| SRR9715741 | Leaf | 2.047 |
| SRR9715739 | Root | 11.353 |
| SRR9715742 | Root | 6.065 |
| SRR9715743 | Root | 5.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.204 |
| SRR8749028 | MeJA induced 9h | 3.210 |
| SRR8749029 | MeJA induced 9h | 5.402 |
| SRR8749030 | Uninduced | 0.106 |
| SRR8749031 | Uninduced | 0.682 |
| SRR8749032 | Uninduced | 1.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.135 |
| SRR8400027 | Control - Root | 9.034 |