Gene detail information of Glyur005504s00047692 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05504 | 8353 | 8535 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.580 |
| SRR1783600 | control | 2.080 |
| SRR1783602 | moderate drought stress | 7.050 |
| SRR1811619 | moderate drought stress | 4.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.759 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.625 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.815 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.871 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.975 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.780 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.123 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.108 |
| SRR2868004 | Drought Stress (root) | 47.054 |
| SRR2967015 | Control (root) | 43.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.580 |
| SRR9715740 | Leaf | 0.992 |
| SRR9715741 | Leaf | 5.275 |
| SRR9715739 | Root | 0.576 |
| SRR9715742 | Root | 1.530 |
| SRR9715743 | Root | 0.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.456 |
| SRR8749028 | MeJA induced 9h | 8.187 |
| SRR8749029 | MeJA induced 9h | 7.576 |
| SRR8749030 | Uninduced | 10.875 |
| SRR8749031 | Uninduced | 7.127 |
| SRR8749032 | Uninduced | 6.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.294 |
| SRR8400027 | Control - Root | 11.433 |