Gene detail information of Glyur005496s00045012 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003553753.1 | 4.08E-08 | PREDICTED: mediator-associated protein 1-like [Glycine max] |
| trEMBL | tr|I1NC70|I1NC70_SOYBN | 2.00E-08 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G43180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05496 | 6007 | 8273 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.693 |
| SRR1783600 | control | 16.315 |
| SRR1783602 | moderate drought stress | 20.721 |
| SRR1811619 | moderate drought stress | 20.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.960 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.148 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.674 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.037 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.235 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.468 |
| SRR2868004 | Drought Stress (root) | 0.423 |
| SRR2967015 | Control (root) | 1.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.148 |
| SRR9715740 | Leaf | 0.067 |
| SRR9715741 | Leaf | 0.181 |
| SRR9715739 | Root | 0.237 |
| SRR9715742 | Root | 0.320 |
| SRR9715743 | Root | 0.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.145 |
| SRR8749028 | MeJA induced 9h | 2.099 |
| SRR8749029 | MeJA induced 9h | 0.632 |
| SRR8749030 | Uninduced | 0.592 |
| SRR8749031 | Uninduced | 0.162 |
| SRR8749032 | Uninduced | 0.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.343 |
| SRR8400027 | Control - Root | 1.337 |