Gene detail information of Glyur005487s00043698 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02710.1 | 2.00E-08 | ARM repeat superfamily protein |
| NR | XP_004493103.1 | 4.71E-31 | PREDICTED: uncharacterized protein LOC101489051 [Cicer arietinum] |
| trEMBL | tr|G7J7W2|G7J7W2_MEDTR | 1.00E-21 | Beta-catenin-like protein {ECO:0000313|EMBL:AES70856.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05487 | 3706 | 8806 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005487s00043698.1 | PF08216.6 | CTNNBL | 304 | 345 | 5.70E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.551 |
| SRR1783600 | control | 56.257 |
| SRR1783602 | moderate drought stress | 19.234 |
| SRR1811619 | moderate drought stress | 18.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.673 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.846 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.483 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.472 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.583 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.098 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.589 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.277 |
| SRR2868004 | Drought Stress (root) | 5.353 |
| SRR2967015 | Control (root) | 5.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.667 |
| SRR9715740 | Leaf | 0.912 |
| SRR9715741 | Leaf | 1.680 |
| SRR9715739 | Root | 3.882 |
| SRR9715742 | Root | 20.180 |
| SRR9715743 | Root | 15.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.316 |
| SRR8749028 | MeJA induced 9h | 3.392 |
| SRR8749029 | MeJA induced 9h | 1.156 |
| SRR8749030 | Uninduced | 0.028 |
| SRR8749031 | Uninduced | 0.050 |
| SRR8749032 | Uninduced | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.393 |
| SRR8400027 | Control - Root | 21.458 |