Gene detail information of Glyur005487s00043697 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007161554.1 | 8.49E-07 | hypothetical protein PHAVU_001G079300g [Phaseolus vulgaris] |
| trEMBL | tr|V7CVZ3|V7CVZ3_PHAVU | 3.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:ESW33548.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05487 | 55 | 159 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.231 |
| SRR1783600 | control | 39.606 |
| SRR1783602 | moderate drought stress | 15.955 |
| SRR1811619 | moderate drought stress | 18.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.487 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 87.618 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.484 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.811 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.551 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.641 |
| SRR2868004 | Drought Stress (root) | 0.046 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.212 |
| SRR9715739 | Root | 15.972 |
| SRR9715742 | Root | 23.387 |
| SRR9715743 | Root | 24.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.397 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.344 |
| SRR8400027 | Control - Root | 15.339 |