Gene detail information of Glyur005463s00042017 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23640.2 | 4.00E-116 | heteroglycan glucosidase 1 |
| NR | XP_004512368.1 | 1.67E-179 | PREDICTED: alpha-glucosidase 2-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|A0A072UDG9|A0A072UDG9_MEDTR | 2.00E-172 | Neutral alpha-glucosidase {ECO:0000313|EMBL:KEH27672.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05463 | 2796 | 8577 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.592 |
| SRR1783600 | control | 33.133 |
| SRR1783602 | moderate drought stress | 22.510 |
| SRR1811619 | moderate drought stress | 22.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.454 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.072 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.643 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.650 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.390 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.834 |
| SRR2868004 | Drought Stress (root) | 53.270 |
| SRR2967015 | Control (root) | 46.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.863 |
| SRR9715740 | Leaf | 36.700 |
| SRR9715741 | Leaf | 27.258 |
| SRR9715739 | Root | 18.500 |
| SRR9715742 | Root | 24.099 |
| SRR9715743 | Root | 25.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.814 |
| SRR8749028 | MeJA induced 9h | 12.918 |
| SRR8749029 | MeJA induced 9h | 12.879 |
| SRR8749030 | Uninduced | 11.019 |
| SRR8749031 | Uninduced | 4.788 |
| SRR8749032 | Uninduced | 9.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 62.826 |
| SRR8400027 | Control - Root | 64.422 |