Gene detail information of Glyur005419s00043570 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51080.1 | 2.00E-15 | |
| NR | XP_004488964.1 | 4.48E-27 | PREDICTED: uncharacterized protein LOC101503340 [Cicer arietinum] |
| trEMBL | tr|I3S811|I3S811_LOTJA | 4.00E-26 | Uncharacterized protein {ECO:0000313|EMBL:AFK36403.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05419 | 2 | 1799 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.018 |
| SRR1783600 | control | 3.262 |
| SRR1783602 | moderate drought stress | 2.885 |
| SRR1811619 | moderate drought stress | 2.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.949 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.865 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.852 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.806 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.312 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.134 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.873 |
| SRR2868004 | Drought Stress (root) | 16.348 |
| SRR2967015 | Control (root) | 17.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.196 |
| SRR9715740 | Leaf | 1.402 |
| SRR9715741 | Leaf | 4.025 |
| SRR9715739 | Root | 0.808 |
| SRR9715742 | Root | 6.801 |
| SRR9715743 | Root | 4.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.550 |
| SRR8749028 | MeJA induced 9h | 12.477 |
| SRR8749029 | MeJA induced 9h | 6.879 |
| SRR8749030 | Uninduced | 5.436 |
| SRR8749031 | Uninduced | 5.865 |
| SRR8749032 | Uninduced | 4.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.840 |
| SRR8400027 | Control - Root | 5.600 |