Gene detail information of Glyur005411s00045657 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01680.1 | 2.00E-20 | |
| NR | KHN01070.1 | 3.31E-120 | hypothetical protein glysoja_000738 [Glycine soja] |
| trEMBL | tr|K7LK84|K7LK84_SOYBN | 1.00E-120 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G32980.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05411 | 913 | 4380 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005411s00045657.1 | PF14576.1 | SEO_N | 24 | 67 | 9.60E-11 |
| Glyur005411s00045657.1 | PF14576.1 | SEO_N | 71 | 139 | 5.10E-28 |
| Glyur005411s00045657.1 | PF14576.1 | SEO_N | 258 | 359 | 2.40E-22 |
| Glyur005411s00045657.1 | PF14577.1 | SEO_C | 352 | 527 | 1.60E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.008 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.022 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.018 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.519 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.015 |
| SRR2967015 | Control (root) | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 121.565 |
| SRR9715740 | Leaf | 14.527 |
| SRR9715741 | Leaf | 34.253 |
| SRR9715739 | Root | 0.031 |
| SRR9715742 | Root | 0.273 |
| SRR9715743 | Root | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.004 |