Gene detail information of Glyur005408s00043262 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73320.1 | 1.00E-37 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004512683.1 | 4.30E-69 | PREDICTED: protein-lysine methyltransferase METTL21D-like [Cicer arietinum] |
| trEMBL | tr|V7C2V8|V7C2V8_PHAVU | 1.00E-68 | Uncharacterized protein {ECO:0000313|EMBL:ESW24507.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05408 | 23 | 1355 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005408s00043262.1 | PF10294.4 | Methyltransf_16 | 92 | 134 | 1.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.476 |
| SRR1783600 | control | 13.199 |
| SRR1783602 | moderate drought stress | 10.178 |
| SRR1811619 | moderate drought stress | 10.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.778 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.724 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.999 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.750 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.250 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.851 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.424 |
| SRR2868004 | Drought Stress (root) | 18.104 |
| SRR2967015 | Control (root) | 15.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.860 |
| SRR9715740 | Leaf | 14.931 |
| SRR9715741 | Leaf | 19.852 |
| SRR9715739 | Root | 31.947 |
| SRR9715742 | Root | 29.542 |
| SRR9715743 | Root | 30.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.443 |
| SRR8749028 | MeJA induced 9h | 19.292 |
| SRR8749029 | MeJA induced 9h | 8.469 |
| SRR8749030 | Uninduced | 3.876 |
| SRR8749031 | Uninduced | 1.800 |
| SRR8749032 | Uninduced | 4.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.762 |
| SRR8400027 | Control - Root | 51.530 |