Gene detail information of Glyur005387s00045723 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01430.2 | 5.00E-37 | Got1/Sft2-like vescicle transport protein family |
| NR | KHN12031.1 | 4.62E-51 | Putative Golgi transport protein 1 [Glycine soja] |
| trEMBL | tr|I1NDW7|I1NDW7_SOYBN | 5.00E-51 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G08060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05387 | 950 | 1598 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005387s00045723.1 | PF04178.7 | Got1 | 1 | 81 | 7.70E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.606 |
| SRR1783600 | control | 6.992 |
| SRR1783602 | moderate drought stress | 5.187 |
| SRR1811619 | moderate drought stress | 3.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.919 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.436 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.325 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.520 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.238 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.018 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.253 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.312 |
| SRR2868004 | Drought Stress (root) | 17.290 |
| SRR2967015 | Control (root) | 17.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.946 |
| SRR9715740 | Leaf | 14.475 |
| SRR9715741 | Leaf | 13.450 |
| SRR9715739 | Root | 4.353 |
| SRR9715742 | Root | 9.543 |
| SRR9715743 | Root | 6.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.310 |
| SRR8749028 | MeJA induced 9h | 1.788 |
| SRR8749029 | MeJA induced 9h | 4.254 |
| SRR8749030 | Uninduced | 1.549 |
| SRR8749031 | Uninduced | 0.700 |
| SRR8749032 | Uninduced | 9.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.753 |
| SRR8400027 | Control - Root | 14.257 |