Gene detail information of Glyur005377s00046757 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK41340.1 | 3.08E-23 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SM48|I3SM48_MEDTR | 1.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:AFK41340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05377 | 5816 | 7357 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.692 |
| SRR1783600 | control | 4.452 |
| SRR1783602 | moderate drought stress | 5.156 |
| SRR1811619 | moderate drought stress | 5.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.994 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.690 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.373 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.242 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.371 |
| SRR2868004 | Drought Stress (root) | 211.019 |
| SRR2967015 | Control (root) | 191.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.782 |
| SRR9715740 | Leaf | 15.588 |
| SRR9715741 | Leaf | 61.650 |
| SRR9715739 | Root | 3.152 |
| SRR9715742 | Root | 25.894 |
| SRR9715743 | Root | 19.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.160 |
| SRR8749028 | MeJA induced 9h | 90.853 |
| SRR8749029 | MeJA induced 9h | 48.530 |
| SRR8749030 | Uninduced | 203.658 |
| SRR8749031 | Uninduced | 195.043 |
| SRR8749032 | Uninduced | 166.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.843 |
| SRR8400027 | Control - Root | 9.788 |