Gene detail information of Glyur005367s00046073 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN64761.1 | 2.35E-16 | hypothetical protein Csa_1G089495 [Cucumis sativus] |
| trEMBL | tr|A0A0A0LXN2|A0A0A0LXN2_CUCSA | 9.00E-17 | Uncharacterized protein {ECO:0000313|EMBL:KGN64761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05367 | 2406 | 2879 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.533 |
| SRR1783600 | control | 15.065 |
| SRR1783602 | moderate drought stress | 38.126 |
| SRR1811619 | moderate drought stress | 38.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 104.679 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 106.562 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 997.946 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 979.433 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 127.920 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 102.195 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 113.861 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 143.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 94.860 |
| SRR2868004 | Drought Stress (root) | 76.863 |
| SRR2967015 | Control (root) | 155.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.458 |
| SRR9715740 | Leaf | 28.229 |
| SRR9715741 | Leaf | 36.975 |
| SRR9715739 | Root | 24.787 |
| SRR9715742 | Root | 68.390 |
| SRR9715743 | Root | 58.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.163 |
| SRR8749028 | MeJA induced 9h | 28.802 |
| SRR8749029 | MeJA induced 9h | 28.571 |
| SRR8749030 | Uninduced | 2.433 |
| SRR8749031 | Uninduced | 0.297 |
| SRR8749032 | Uninduced | 1.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.531 |
| SRR8400027 | Control - Root | 71.663 |