Gene detail information of Glyur005338s00040308.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G79750.10NADP-malic enzyme 4
NRXP_003546557.10PREDICTED: NADP-dependent malic enzyme 4, chloroplastic-like [Glycine max]
COGYP_007511972.10malate dehydrogenase [Bradyrhizobium oligotrophicum S58]
Swissprottr|Q9CA83|MAOP4_ARATH0NADP-dependent malic enzyme 4, chloroplastic (Precursor)
trEMBLtr|I1MCU4|I1MCU4_SOYBN0Malic enzyme {ECO:0000256|RuleBase:RU003426}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0533828328601+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00029E1.1.1.40, maeBEC:1.1.1.40Carbon metabolismmap01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006108  malate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004470  malic enzyme activity

GO:0004471  malate dehydrogenase (decarboxylating) (NAD+) activity

GO:0051287  NAD binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005338s00040308.1PF00390.14malic1663472.00E-78
Glyur005338s00040308.1PF03949.10Malic_M3575981.80E-80


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control91.681
SRR1783600control91.300
SRR1783602moderate drought stress88.898
SRR1811619moderate drought stress88.489

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain89.288
DRR006520Root Summer glycyrrhizin high producing strain88.165
DRR006521Root Winter glycyrrhizin high producing strain81.579
DRR006522Root Winter glycyrrhizin high producing strain76.973
DRR006523Root Summer glycyrrhizin low producing strain154.516
DRR006524Root Summer glycyrrhizin low producing strain152.619
DRR006525Leaf Summer glycyrrhizin high producing strain51.810
DRR006526Leaf Summer glycyrrhizin high producing strain52.004

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)148.726
SRR2868004Drought Stress (root)152.410
SRR2967015Control (root)119.600

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf197.690
SRR9715740Leaf237.229
SRR9715741Leaf133.140
SRR9715739Root46.436
SRR9715742Root94.676
SRR9715743Root87.564

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h208.530
SRR8749028MeJA induced 9h596.291
SRR8749029MeJA induced 9h621.111
SRR8749030Uninduced521.564
SRR8749031Uninduced615.880
SRR8749032Uninduced903.101

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root180.046
SRR8400027Control - Root168.783

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved