Gene detail information of Glyur005334s00043880 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G50180.1 | 2.00E-16 | NB-ARC domain-containing disease resistance protein |
| NR | KEH30519.1 | 1.26E-51 | NBS-LRR type disease resistance protein [Medicago truncatula] |
| Swissprot | tr|Q9SX38|DRL4_ARATH | 1.00E-17 | Putative disease resistance protein At1g50180 |
| trEMBL | tr|A0A072UL87|A0A072UL87_MEDTR | 5.00E-52 | NBS-LRR type disease resistance protein {ECO:0000313|EMBL:KEH30519.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05334 | 6735 | 8519 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005334s00043880.1 | PF00931.17 | NB-ARC | 77 | 152 | 1.10E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.238 |
| SRR1783600 | control | 0.508 |
| SRR1783602 | moderate drought stress | 5.360 |
| SRR1811619 | moderate drought stress | 5.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.505 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.992 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.332 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.577 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.003 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.911 |
| SRR9715740 | Leaf | 5.625 |
| SRR9715741 | Leaf | 2.077 |
| SRR9715739 | Root | 5.471 |
| SRR9715742 | Root | 4.159 |
| SRR9715743 | Root | 3.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.502 |
| SRR8400027 | Control - Root | 0.969 |