Gene detail information of Glyur005334s00043878 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43470.2 | 1.00E-09 | Disease resistance protein (CC-NBS-LRR class) family |
| NR | KEH30519.1 | 6.73E-59 | NBS-LRR type disease resistance protein [Medicago truncatula] |
| Swissprot | tr|Q8W4J9|RPP8_ARATH | 2.00E-10 | Disease resistance protein RPP8 |
| trEMBL | tr|A0A072UL87|A0A072UL87_MEDTR | 3.00E-59 | NBS-LRR type disease resistance protein {ECO:0000313|EMBL:KEH30519.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05334 | 112 | 609 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.024 |
| SRR1783600 | control | 0.068 |
| SRR1783602 | moderate drought stress | 9.891 |
| SRR1811619 | moderate drought stress | 10.718 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.520 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.808 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.555 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.037 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.002 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.787 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.034 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.942 |
| SRR9715740 | Leaf | 54.622 |
| SRR9715741 | Leaf | 9.548 |
| SRR9715739 | Root | 39.051 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 6.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.076 |
| SRR8400027 | Control - Root | 0.000 |