Gene detail information of Glyur005308s00042032 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53400.1 | 3.00E-76 | |
| NR | XP_003537287.1 | 0 | PREDICTED: uncharacterized protein LOC100782226 [Glycine max] |
| trEMBL | tr|I1L8V0|I1L8V0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G05920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05308 | 6422 | 8372 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.541 |
| SRR1783600 | control | 1.483 |
| SRR1783602 | moderate drought stress | 1.549 |
| SRR1811619 | moderate drought stress | 1.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.745 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.613 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.451 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.447 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.762 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.868 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.235 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.315 |
| SRR2868004 | Drought Stress (root) | 13.963 |
| SRR2967015 | Control (root) | 15.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.884 |
| SRR9715740 | Leaf | 0.398 |
| SRR9715741 | Leaf | 0.832 |
| SRR9715739 | Root | 2.311 |
| SRR9715742 | Root | 5.025 |
| SRR9715743 | Root | 4.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.010 |
| SRR8749028 | MeJA induced 9h | 10.138 |
| SRR8749029 | MeJA induced 9h | 4.532 |
| SRR8749030 | Uninduced | 1.576 |
| SRR8749031 | Uninduced | 0.265 |
| SRR8749032 | Uninduced | 0.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.276 |
| SRR8400027 | Control - Root | 5.024 |