Gene detail

Gene detail information of Glyur005303s00044323

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G70300.1	0	K+ uptake permease 6
NR	XP_006585956.1	0	PREDICTED: potassium transporter 6-like isoform X1 [Glycine max]
COG	YP_002760035.1	3.00E-86	putative potassium transport system protein Kup [Gemmatimonas aurantiaca T-27]
Swissprot	tr\|Q8W4I4\|POT6_ARATH	0	Potassium transporter 6
trEMBL	tr\|K7L9J8\|K7L9J8_SOYBN	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}

Sequence

Transcript Sequence

>Glyur005303s00044323.1
ATGGATCTGGAATGTGGGATTCATCAAAACTCTAATAAGAAGAAGGAATCATGGAAAACGGTTCTAACTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGAGAGATAAGCACTTCACCACTTTACGTGTACAGGAACACTTTTGCTGAAGACATTGGTCACACAGAGACCAACGAGGAGATTTATGGTGTTTTGTCTTTGGTGTTTTGGACTCTTACATTGGTGCCTTTGGTGAAGTATGTGTTCATAGTGCTCAAAGCTGATGACAATGGTGAAGGTGGCACCTTTGCACTCTACTCTTTGCTGTGTCGCCATGCCCGGGTTGGCTTATTGCCCAATTGCCAAGTGGCAGATGAGGAGCTGTCAGAGTATAAGAAGCAGCACANTTGCTGTCGTCATGTGGCGGTGGCGGCGGCGCCAGATAGAAGCCTTGCTTCAAGGCTTAAGTCCATGTTGGAGATGCACAAGGTGTTGCAGAGGGTTTTGCTGCTTCTGGCTTTGATAGGGACTTGCATGGTCATTGGTGTTGTTTTCTCGGCAGTGTCTGGCCTTGAGCTTTCAATGTCCAAAGAGCATCATAGATATGTAGAAGTTCCAGCTGCATGCATCATAATTATGGGCTTGTTTGCCCTTCAACGTTATGGCACACACAGGGTTGGCTTCTTATTNGCTCCCATAGTTAGTACATGGCTTTTCTGCATTGGTGCCATTGGTGTATACAATATTTTTTNCTGGAACCCTCATGTATACCAAGCACTCTCTCCATATTATGTTGTCAAGTTTTTAAAGAAGACTCAGAGAGGGGGTTGGATGGCCCTTGGTGGAGTTTTGCTGTGCATAACAGGATCAGAATCCATGTTTGCTGGTCTTGGGCACTTTTCACAACTATCAGTCAAGATTGCTTTCACCTTTGTGGTTTATCCATCTCTAATTCTTGCATATATGGGGCAAGCTGCTTATTTTTCTAGGCATCATGATGTTGAACACGAGTATCACTTTGGTTTTTATGTATCTGTACCAGTTGTGGGAAGCCAAGCTATCATCACTGGAACTTTCTCAATCATCAAGCAATGTTCTGCATTGAGTTGCTTCCCAAGAGTTAAAGTGGTCCACACTTCATCCAAAATTCATGGGCAAGTATATATCCCTGAGATCAACTGGCTGTTGATGCTCTTGTGTTTGGCTGTAACTATTGGTTTCAGAGACACAAAGCGGATGGGTAATGCCTCAGGTTTGGCAGTTATCTCAGTGATGTTAGTCACCACATGTTTGATGTCACTGATCATGGTACTCTGCTGGCACCGGAATGTTTTCCTAGCACTTGGTTTTGTTCTTCTATATGGCACCATTGAGNCTCTATTCTTCTCAGCTTCTGTCATCAAATTCTTTGAAGGAGCATGGGTGCCAATTGTTCTAGCACTTGTGTTCCTAACTGTCATGTGTGTTTGGCACTATGGTACTCTCAAAAGGTATGAATTTGATGTCCAAAACAAGGTCTCAGTCAACTGGCTACTAAGCCTTGGACCTAGCTTAGGCTTCGTCCGAGTCCGCGGCATTGGCCTTGTCCATACTGAGCTATTTTCTGGAATCCCAGCAATCTTCTCCCACTTTGTAACCAACCTACCAGCCTTCCACAAAGTCCTTGTTTTCCTCTGCATCAAACATGTGCCAGTTCCACATGTTAGACCTGAGGAGAGGTTCCTAGTTTGTCGCGTAGGTCCGAGAGGTTTCGGTCTCTACCGGTGTATAGTGAGGTACGGTTACCATGATGTGCACAAGGATGATGTTGAGTTTGAGAAGGATCTTGTATGCAGCATAGCACAGTTGATAAGAAGTACAGGAAGTGATGGATTCAGCACTTCATTTGATGATGAGATTGAAAAGGATCATGGCAACAAAATGGAAGTTGTTGGTACATGTTCTTCTTCTAGCCATCATCATCATCCCATTTTGANGAGTGAGCAAAATGAGGATGATGATGTGGACTACTCAGCTGAGACATCAGAGGTTAGGGAGATGATAAAGTCACCCAAGGTGGTGATCCAACCAAAGAAGAAAAGGGTAAGGTTTGTTATTCCTCCTGAGGGTCCAAAGATTATTGACAATGCTGCAATGGAAGAGTTGCAAGAGTTGATGGAAGCAAGGGAAGTTGGGGTAGCTTACATTATAGGACAGTCCTATATGAGAGCCAAACCAGGGTCTAGCATGTTGAAGAAGTTGATTATCAATTTTGGGTATGAGTTCTTGAGGAAGAATTGCAGGGCACCCTCCTATGTACTTAGTGCTCCTCATGCATCTTCTTTAGAAGTTGGGATGATGTACCAAGTTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold05303	2669	7869	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071805 potassium ion transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0015079 potassium ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur005303s00044323.1	PF02705.11	K_trans	25	589	8.50E-161

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.373
SRR1783600	control	0.391
SRR1783602	moderate drought stress	0.204
SRR1811619	moderate drought stress	0.189

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.094
DRR006524	Root Summer glycyrrhizin low producing strain	0.094
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.798
SRR2868004	Drought Stress (root)	9.181
SRR2967015	Control (root)	11.060

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.085
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.370
SRR9715742	Root	0.172
SRR9715743	Root	0.210

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.054
SRR8749028	MeJA induced 9h	0.219
SRR8749029	MeJA induced 9h	0.026
SRR8749030	Uninduced	0.027
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.049

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.126
SRR8400027	Control - Root	0.995