Gene detail information of Glyur005286s00042046 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05286 | 3681 | 6176 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.582 |
| SRR1783600 | control | 3.710 |
| SRR1783602 | moderate drought stress | 3.117 |
| SRR1811619 | moderate drought stress | 2.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.729 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.110 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.825 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.930 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.368 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.704 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.489 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.923 |
| SRR2868004 | Drought Stress (root) | 32.472 |
| SRR2967015 | Control (root) | 32.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.385 |
| SRR9715740 | Leaf | 1.265 |
| SRR9715741 | Leaf | 1.190 |
| SRR9715739 | Root | 0.985 |
| SRR9715742 | Root | 0.570 |
| SRR9715743 | Root | 1.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.459 |
| SRR8749028 | MeJA induced 9h | 17.174 |
| SRR8749029 | MeJA induced 9h | 15.591 |
| SRR8749030 | Uninduced | 25.647 |
| SRR8749031 | Uninduced | 45.518 |
| SRR8749032 | Uninduced | 34.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.104 |
| SRR8400027 | Control - Root | 6.471 |