Gene detail information of Glyur005279s00046291 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53280.1 | 1.00E-08 | plastid division1 |
| NR | XP_003544091.1 | 1.41E-11 | PREDICTED: plastid division protein PDV1-like [Glycine max] |
| Swissprot | tr|Q9FK13|PDV1_ARATH | 9.00E-10 | Plastid division protein PDV1 |
| trEMBL | tr|K7M7A2|K7M7A2_SOYBN | 5.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G28953.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05279 | 4362 | 6692 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.883 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.007 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.162 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.531 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.031 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.929 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.929 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.353 |
| SRR2868004 | Drought Stress (root) | 7.370 |
| SRR2967015 | Control (root) | 9.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.048 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.186 |
| SRR8749028 | MeJA induced 9h | 13.073 |
| SRR8749029 | MeJA induced 9h | 4.477 |
| SRR8749030 | Uninduced | 4.375 |
| SRR8749031 | Uninduced | 1.360 |
| SRR8749032 | Uninduced | 1.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.057 |
| SRR8400027 | Control - Root | 0.000 |