Gene detail information of Glyur005271s00044601 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48550.1 | 3.00E-29 | |
| NR | XP_004515810.1 | 5.36E-79 | PREDICTED: uncharacterized protein LOC101511969 [Cicer arietinum] |
| Swissprot | tr|F4IPE3|IDD15_ARATH | 4.00E-14 | Protein SHOOT GRAVITROPISM 5 |
| trEMBL | tr|G7JLC1|G7JLC1_MEDTR | 3.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:AFK44242.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05271 | 360 | 800 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.727 |
| SRR1783600 | control | 2.812 |
| SRR1783602 | moderate drought stress | 2.355 |
| SRR1811619 | moderate drought stress | 1.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.103 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.669 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.002 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.753 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.246 |
| SRR2868004 | Drought Stress (root) | 8.457 |
| SRR2967015 | Control (root) | 11.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.977 |
| SRR9715740 | Leaf | 3.309 |
| SRR9715741 | Leaf | 1.307 |
| SRR9715739 | Root | 18.560 |
| SRR9715742 | Root | 5.530 |
| SRR9715743 | Root | 5.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.075 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.211 |
| SRR8400027 | Control - Root | 16.582 |