Gene detail information of Glyur005264s00044555 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48320.1 | 9.00E-43 | Thioesterase superfamily protein |
| NR | AFK39285.1 | 1.17E-70 | unknown [Lotus japonicus] |
| COG | YP_003883479.1 | 2.00E-10 | esterase [Dickeya dadantii 3937] |
| trEMBL | tr|I3SG93|I3SG93_LOTJA | 4.00E-71 | Uncharacterized protein {ECO:0000313|EMBL:AFK39285.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05264 | 5522 | 9519 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005264s00044555.1 | PF03061.17 | 4HBT | 41 | 95 | 4.90E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.187 |
| SRR1783600 | control | 15.199 |
| SRR1783602 | moderate drought stress | 8.971 |
| SRR1811619 | moderate drought stress | 8.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.222 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.504 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.841 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.265 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.695 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.156 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.507 |
| SRR2868004 | Drought Stress (root) | 66.659 |
| SRR2967015 | Control (root) | 54.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 66.352 |
| SRR9715740 | Leaf | 64.068 |
| SRR9715741 | Leaf | 68.522 |
| SRR9715739 | Root | 13.128 |
| SRR9715742 | Root | 23.405 |
| SRR9715743 | Root | 15.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.511 |
| SRR8749028 | MeJA induced 9h | 13.174 |
| SRR8749029 | MeJA induced 9h | 10.213 |
| SRR8749030 | Uninduced | 67.625 |
| SRR8749031 | Uninduced | 58.005 |
| SRR8749032 | Uninduced | 24.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.886 |
| SRR8400027 | Control - Root | 55.318 |