Gene detail information of Glyur005205s00043231 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AAC70787.1 | 1.67E-50 | unknown [Glycine max] |
| Swissprot | tr|Q94BP0|SLK2_ARATH | 7.00E-09 | Probable transcriptional regulator SLK2 |
| trEMBL | tr|Q9ZSM7|Q9ZSM7_SOYBN | 6.00E-51 | Putative uncharacterized protein {ECO:0000313|EMBL:AAC70787.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05205 | 2505 | 3171 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.649 |
| SRR1783600 | control | 20.508 |
| SRR1783602 | moderate drought stress | 18.004 |
| SRR1811619 | moderate drought stress | 25.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.539 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.402 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.814 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.479 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.470 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.685 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.826 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.417 |
| SRR2868004 | Drought Stress (root) | 0.502 |
| SRR2967015 | Control (root) | 0.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.323 |
| SRR9715740 | Leaf | 24.524 |
| SRR9715741 | Leaf | 19.772 |
| SRR9715739 | Root | 6.371 |
| SRR9715742 | Root | 11.685 |
| SRR9715743 | Root | 10.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.788 |
| SRR8749028 | MeJA induced 9h | 1.259 |
| SRR8749029 | MeJA induced 9h | 0.479 |
| SRR8749030 | Uninduced | 0.484 |
| SRR8749031 | Uninduced | 0.309 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.233 |
| SRR8400027 | Control - Root | 17.122 |