Gene detail information of Glyur005205s00043230 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62090.2 | 2.00E-30 | SEUSS-like 2 |
| NR | AAC70787.1 | 2.55E-68 | unknown [Glycine max] |
| Swissprot | tr|Q94BP0|SLK2_ARATH | 2.00E-46 | Probable transcriptional regulator SLK2 |
| trEMBL | tr|Q9ZSM7|Q9ZSM7_SOYBN | 1.00E-68 | Putative uncharacterized protein {ECO:0000313|EMBL:AAC70787.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05205 | 326 | 2483 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.186 |
| SRR1783600 | control | 6.472 |
| SRR1783602 | moderate drought stress | 8.850 |
| SRR1811619 | moderate drought stress | 10.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.165 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.055 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.478 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.753 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.424 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.205 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.850 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.795 |
| SRR2868004 | Drought Stress (root) | 2.260 |
| SRR2967015 | Control (root) | 2.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.108 |
| SRR9715740 | Leaf | 3.148 |
| SRR9715741 | Leaf | 3.176 |
| SRR9715739 | Root | 0.831 |
| SRR9715742 | Root | 2.192 |
| SRR9715743 | Root | 2.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.592 |
| SRR8749028 | MeJA induced 9h | 2.519 |
| SRR8749029 | MeJA induced 9h | 1.300 |
| SRR8749030 | Uninduced | 0.688 |
| SRR8749031 | Uninduced | 1.086 |
| SRR8749032 | Uninduced | 1.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.723 |
| SRR8400027 | Control - Root | 4.120 |