Gene detail information of Glyur005198s00045863 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02050.1 | 2.00E-40 | Mitochondrial glycoprotein family protein |
| NR | XP_007140470.1 | 3.76E-91 | hypothetical protein PHAVU_008G115200g [Phaseolus vulgaris] |
| Swissprot | tr|Q8W487|YB95_ARATH | 2.00E-37 | Uncharacterized protein At2g39795, mitochondrial (Precursor) |
| trEMBL | tr|V7B3R1|V7B3R1_PHAVU | 1.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:ESW12464.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05198 | 4133 | 6444 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005198s00045863.1 | PF02330.11 | MAM33 | 75 | 244 | 9.20E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.918 |
| SRR1811619 | moderate drought stress | 1.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.194 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.233 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.046 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.221 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.216 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.445 |
| SRR8400027 | Control - Root | 4.234 |