Gene detail information of Glyur005187s00045892 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003552641.1 | 4.78E-32 | PREDICTED: uncharacterized protein LOC100805736 [Glycine max] |
| trEMBL | tr|I1MZ73|I1MZ73_SOYBN | 2.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03640.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05187 | 4351 | 4963 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.013 |
| SRR1783602 | moderate drought stress | 0.547 |
| SRR1811619 | moderate drought stress | 0.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.372 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.313 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.143 |
| SRR2868004 | Drought Stress (root) | 0.544 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.277 |
| SRR9715741 | Leaf | 0.186 |
| SRR9715739 | Root | 6.938 |
| SRR9715742 | Root | 4.968 |
| SRR9715743 | Root | 5.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.192 |
| SRR8749028 | MeJA induced 9h | 2.041 |
| SRR8749029 | MeJA induced 9h | 0.660 |
| SRR8749030 | Uninduced | 14.081 |
| SRR8749031 | Uninduced | 3.508 |
| SRR8749032 | Uninduced | 9.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.672 |
| SRR8400027 | Control - Root | 0.706 |