Gene detail information of Glyur005186s00046984 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004508409.1 | 2.94E-06 | PREDICTED: putative protein TPRXL-like [Cicer arietinum] |
| trEMBL | tr|I1MHX7|I1MHX7_SOYBN | 5.00E-06 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G23750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05186 | 7121 | 9031 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.930 |
| SRR1783600 | control | 21.629 |
| SRR1783602 | moderate drought stress | 38.893 |
| SRR1811619 | moderate drought stress | 38.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.125 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 392.880 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 339.312 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.424 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.214 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.740 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.901 |
| SRR2868004 | Drought Stress (root) | 8.743 |
| SRR2967015 | Control (root) | 15.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.002 |
| SRR9715740 | Leaf | 1.558 |
| SRR9715741 | Leaf | 1.653 |
| SRR9715739 | Root | 2.811 |
| SRR9715742 | Root | 2.745 |
| SRR9715743 | Root | 4.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.902 |
| SRR8749028 | MeJA induced 9h | 4.090 |
| SRR8749029 | MeJA induced 9h | 3.821 |
| SRR8749030 | Uninduced | 1.806 |
| SRR8749031 | Uninduced | 2.852 |
| SRR8749032 | Uninduced | 9.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.255 |
| SRR8400027 | Control - Root | 5.682 |