Gene detail information of Glyur005174s00045115 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24750.1 | 2.00E-08 | |
| NR | XP_003623189.1 | 6.83E-121 | hypothetical protein MTR_7g065510 [Medicago truncatula] |
| trEMBL | tr|V7B403|V7B403_PHAVU | 5.00E-112 | Uncharacterized protein {ECO:0000313|EMBL:ESW12559.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05174 | 6354 | 8661 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.239 |
| SRR1783600 | control | 0.237 |
| SRR1783602 | moderate drought stress | 0.111 |
| SRR1811619 | moderate drought stress | 0.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.078 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.895 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.879 |
| SRR2868004 | Drought Stress (root) | 18.392 |
| SRR2967015 | Control (root) | 17.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.703 |
| SRR9715740 | Leaf | 2.687 |
| SRR9715741 | Leaf | 0.791 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.319 |
| SRR8749028 | MeJA induced 9h | 8.653 |
| SRR8749029 | MeJA induced 9h | 9.123 |
| SRR8749030 | Uninduced | 18.994 |
| SRR8749031 | Uninduced | 27.297 |
| SRR8749032 | Uninduced | 13.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.826 |
| SRR8400027 | Control - Root | 0.727 |