Gene detail information of Glyur005147s00047575 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN21817.1 | 1.51E-16 | hypothetical protein glysoja_042914 [Glycine soja] |
| trEMBL | tr|K7K2K5|K7K2K5_SOYBN | 6.00E-17 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G17590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05147 | 8895 | 9092 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.177 |
| SRR1783600 | control | 1.371 |
| SRR1783602 | moderate drought stress | 1.861 |
| SRR1811619 | moderate drought stress | 1.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.132 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.322 |
| SRR2868004 | Drought Stress (root) | 49.022 |
| SRR2967015 | Control (root) | 1.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.493 |
| SRR9715740 | Leaf | 4.428 |
| SRR9715741 | Leaf | 3.711 |
| SRR9715739 | Root | 0.196 |
| SRR9715742 | Root | 55.673 |
| SRR9715743 | Root | 36.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 172.689 |
| SRR8749028 | MeJA induced 9h | 506.382 |
| SRR8749029 | MeJA induced 9h | 1063.939 |
| SRR8749030 | Uninduced | 20.679 |
| SRR8749031 | Uninduced | 329.583 |
| SRR8749032 | Uninduced | 418.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.394 |
| SRR8400027 | Control - Root | 3.372 |