Gene detail information of Glyur005142s00040375 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17610.1 | 7.00E-39 | |
| NR | KHN30860.1 | 8.37E-66 | hypothetical protein glysoja_037252 [Glycine soja] |
| trEMBL | tr|I1JME9|I1JME9_SOYBN | 3.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G23950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05142 | 6819 | 10044 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.241 |
| SRR1783600 | control | 8.366 |
| SRR1783602 | moderate drought stress | 6.738 |
| SRR1811619 | moderate drought stress | 6.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.284 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.175 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.030 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.302 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.441 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.088 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.074 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.332 |
| SRR2868004 | Drought Stress (root) | 13.600 |
| SRR2967015 | Control (root) | 11.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.939 |
| SRR9715740 | Leaf | 22.227 |
| SRR9715741 | Leaf | 19.744 |
| SRR9715739 | Root | 3.216 |
| SRR9715742 | Root | 7.479 |
| SRR9715743 | Root | 7.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.285 |
| SRR8749028 | MeJA induced 9h | 10.261 |
| SRR8749029 | MeJA induced 9h | 12.421 |
| SRR8749030 | Uninduced | 18.067 |
| SRR8749031 | Uninduced | 12.509 |
| SRR8749032 | Uninduced | 12.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.963 |
| SRR8400027 | Control - Root | 20.159 |