Gene detail information of Glyur005059s00044431 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16750.1 | 3.00E-05 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003516798.1 | 4.99E-28 | PREDICTED: ethylene-responsive transcription factor ERF034-like [Glycine max] |
| Swissprot | tr|Q8LBQ7|ERF34_ARATH | 4.00E-18 | Ethylene-responsive transcription factor ERF034 |
| trEMBL | tr|I1J6D4|I1J6D4_SOYBN | 2.00E-28 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G13410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05059 | 3613 | 7167 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.434 |
| SRR1783600 | control | 0.340 |
| SRR1783602 | moderate drought stress | 0.100 |
| SRR1811619 | moderate drought stress | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.831 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.530 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.648 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.314 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.604 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.113 |
| SRR2868004 | Drought Stress (root) | 5.744 |
| SRR2967015 | Control (root) | 9.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.072 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.155 |
| SRR8400027 | Control - Root | 1.052 |