Gene detail information of Glyur005050s00044032 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46920.2 | 0 | Protein phosphatase 2C family protein |
| NR | XP_003554585.1 | 0 | PREDICTED: protein phosphatase 2C 32-like [Glycine max] |
| Swissprot | tr|Q8RWN7|P2C32_ARATH | 0 | Protein phosphatase 2C 32 |
| trEMBL | tr|K7MZP1|K7MZP1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G41060.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05050 | 5716 | 10654 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005050s00044032.1 | PF00481.16 | PP2C | 592 | 817 | 1.10E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.404 |
| SRR1783600 | control | 11.479 |
| SRR1783602 | moderate drought stress | 9.774 |
| SRR1811619 | moderate drought stress | 9.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.266 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.073 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.366 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.351 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.272 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.596 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.991 |
| SRR2868004 | Drought Stress (root) | 23.109 |
| SRR2967015 | Control (root) | 23.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.603 |
| SRR9715740 | Leaf | 11.838 |
| SRR9715741 | Leaf | 13.919 |
| SRR9715739 | Root | 3.897 |
| SRR9715742 | Root | 17.094 |
| SRR9715743 | Root | 14.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.029 |
| SRR8749028 | MeJA induced 9h | 13.557 |
| SRR8749029 | MeJA induced 9h | 7.725 |
| SRR8749030 | Uninduced | 7.756 |
| SRR8749031 | Uninduced | 2.573 |
| SRR8749032 | Uninduced | 1.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.112 |
| SRR8400027 | Control - Root | 25.547 |