Gene detail information of Glyur005039s00043093 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34040.2 | 1.00E-06 | Apoptosis inhibitory protein 5 (API5) |
| NR | KDO77768.1 | 3.12E-08 | hypothetical protein CISIN_1g008797mg [Citrus sinensis] |
| trEMBL | tr|A0A067GDK2|A0A067GDK2_CITSI | 1.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:KDO77768.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05039 | 8737 | 9761 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005039s00043093.1 | PF05918.6 | API5 | 17 | 59 | 2.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.606 |
| SRR1783600 | control | 0.748 |
| SRR1783602 | moderate drought stress | 1.694 |
| SRR1811619 | moderate drought stress | 1.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.565 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.412 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.621 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.460 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.927 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.478 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.701 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.315 |
| SRR2868004 | Drought Stress (root) | 6.841 |
| SRR2967015 | Control (root) | 6.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.604 |
| SRR9715740 | Leaf | 3.820 |
| SRR9715741 | Leaf | 0.056 |
| SRR9715739 | Root | 1.154 |
| SRR9715742 | Root | 0.105 |
| SRR9715743 | Root | 0.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.205 |
| SRR8749029 | MeJA induced 9h | 0.104 |
| SRR8749030 | Uninduced | 0.209 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.164 |
| SRR8400027 | Control - Root | 7.038 |