Gene detail information of Glyur005007s00045732 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05007 | 9300 | 10455 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005007s00045732.1 | PF01582.15 | TIR | 36 | 62 | 0.00013 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.390 |
| SRR1783600 | control | 31.314 |
| SRR1783602 | moderate drought stress | 17.165 |
| SRR1811619 | moderate drought stress | 21.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.046 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.184 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.595 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.181 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.175 |
| SRR2868004 | Drought Stress (root) | 4.634 |
| SRR2967015 | Control (root) | 6.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.176 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.273 |
| SRR9715739 | Root | 17.985 |
| SRR9715742 | Root | 17.630 |
| SRR9715743 | Root | 20.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.432 |
| SRR8749028 | MeJA induced 9h | 3.444 |
| SRR8749029 | MeJA induced 9h | 3.426 |
| SRR8749030 | Uninduced | 1.308 |
| SRR8749031 | Uninduced | 1.655 |
| SRR8749032 | Uninduced | 0.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.740 |
| SRR8400027 | Control - Root | 35.982 |