Gene detail information of Glyur005002s00040159 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KDP40971.1 | 1.19E-28 | hypothetical protein JCGZ_24970 [Jatropha curcas] |
| trEMBL | tr|A0A067KXM6|A0A067KXM6_JATCU | 4.00E-29 | Uncharacterized protein {ECO:0000313|EMBL:KDP40971.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05002 | 8326 | 8706 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 778.413 |
| SRR1783600 | control | 781.721 |
| SRR1783602 | moderate drought stress | 743.474 |
| SRR1811619 | moderate drought stress | 740.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.857 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.290 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.110 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 736.802 |
| SRR2868004 | Drought Stress (root) | 367.816 |
| SRR2967015 | Control (root) | 290.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.069 |
| SRR9715740 | Leaf | 2.631 |
| SRR9715741 | Leaf | 6.993 |
| SRR9715739 | Root | 554.982 |
| SRR9715742 | Root | 159.210 |
| SRR9715743 | Root | 204.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.280 |
| SRR8749029 | MeJA induced 9h | 0.269 |
| SRR8749030 | Uninduced | 48.009 |
| SRR8749031 | Uninduced | 253.213 |
| SRR8749032 | Uninduced | 19.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1000.190 |
| SRR8400027 | Control - Root | 963.525 |