Gene detail information of Glyur004992s00041730 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78420.2 | 5.00E-51 | RING/U-box superfamily protein |
| NR | XP_007149319.1 | 3.30E-97 | hypothetical protein PHAVU_005G060500g [Phaseolus vulgaris] |
| trEMBL | tr|V7BW92|V7BW92_PHAVU | 1.00E-97 | Uncharacterized protein {ECO:0000313|EMBL:ESW21313.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04992 | 7319 | 10577 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.843 |
| SRR1783600 | control | 3.500 |
| SRR1783602 | moderate drought stress | 2.715 |
| SRR1811619 | moderate drought stress | 3.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.525 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.369 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.954 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.377 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.823 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.855 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.445 |
| SRR2868004 | Drought Stress (root) | 5.728 |
| SRR2967015 | Control (root) | 4.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.142 |
| SRR9715740 | Leaf | 1.960 |
| SRR9715741 | Leaf | 1.323 |
| SRR9715739 | Root | 0.605 |
| SRR9715742 | Root | 1.363 |
| SRR9715743 | Root | 1.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.565 |
| SRR8749028 | MeJA induced 9h | 3.458 |
| SRR8749029 | MeJA induced 9h | 1.845 |
| SRR8749030 | Uninduced | 2.742 |
| SRR8749031 | Uninduced | 1.937 |
| SRR8749032 | Uninduced | 1.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.585 |
| SRR8400027 | Control - Root | 3.080 |