Gene detail information of Glyur004992s00041728 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH29850.1 | 5.40E-08 | copper ion-binding protein [Medicago truncatula] |
| trEMBL | tr|A0A072UVI4|A0A072UVI4_MEDTR | 2.00E-08 | Copper ion-binding protein {ECO:0000313|EMBL:KEH29850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04992 | 3955 | 5031 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.056 |
| SRR1783600 | control | 3.798 |
| SRR1783602 | moderate drought stress | 4.007 |
| SRR1811619 | moderate drought stress | 4.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.610 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.651 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.326 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.680 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.540 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.328 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.102 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.219 |
| SRR2868004 | Drought Stress (root) | 0.237 |
| SRR2967015 | Control (root) | 0.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.052 |
| SRR9715740 | Leaf | 0.090 |
| SRR9715741 | Leaf | 0.102 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.042 |
| SRR9715743 | Root | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.136 |
| SRR8749028 | MeJA induced 9h | 0.025 |
| SRR8749029 | MeJA induced 9h | 0.464 |
| SRR8749030 | Uninduced | 0.164 |
| SRR8749031 | Uninduced | 0.511 |
| SRR8749032 | Uninduced | 0.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.073 |
| SRR8400027 | Control - Root | 0.132 |