Gene detail information of Glyur004970s00043705 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37980.1 | 3.00E-36 | O-fucosyltransferase family protein |
| NR | XP_004506640.1 | 5.92E-118 | PREDICTED: uncharacterized protein At1g04910-like [Cicer arietinum] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 1.00E-07 | Uncharacterized protein At1g04910 |
| trEMBL | tr|V7AK84|V7AK84_PHAVU | 6.00E-108 | Uncharacterized protein {ECO:0000313|EMBL:ESW05959.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04970 | 4241 | 10243 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.703 |
| SRR1783600 | control | 0.714 |
| SRR1783602 | moderate drought stress | 0.967 |
| SRR1811619 | moderate drought stress | 0.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.111 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.810 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 43.851 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 80.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 83.142 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.148 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.359 |
| SRR2868004 | Drought Stress (root) | 7.479 |
| SRR2967015 | Control (root) | 6.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.480 |
| SRR9715740 | Leaf | 15.528 |
| SRR9715741 | Leaf | 44.569 |
| SRR9715739 | Root | 41.116 |
| SRR9715742 | Root | 202.222 |
| SRR9715743 | Root | 173.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.349 |
| SRR8749028 | MeJA induced 9h | 115.570 |
| SRR8749029 | MeJA induced 9h | 43.588 |
| SRR8749030 | Uninduced | 67.335 |
| SRR8749031 | Uninduced | 24.560 |
| SRR8749032 | Uninduced | 28.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.894 |
| SRR8400027 | Control - Root | 18.029 |