Gene detail information of Glyur004937s00043852 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN48296.1 | 3.13E-16 | hypothetical protein glysoja_007965 [Glycine soja] |
| trEMBL | tr|I1L8V7|I1L8V7_SOYBN | 2.00E-15 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G06030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04937 | 7465 | 10622 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.113 |
| SRR1783600 | control | 33.373 |
| SRR1783602 | moderate drought stress | 9.932 |
| SRR1811619 | moderate drought stress | 9.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.682 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.660 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.655 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.038 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.426 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.634 |
| SRR2868004 | Drought Stress (root) | 33.939 |
| SRR2967015 | Control (root) | 35.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.162 |
| SRR9715740 | Leaf | 15.494 |
| SRR9715741 | Leaf | 26.183 |
| SRR9715739 | Root | 8.257 |
| SRR9715742 | Root | 27.497 |
| SRR9715743 | Root | 22.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.986 |
| SRR8749028 | MeJA induced 9h | 0.348 |
| SRR8749029 | MeJA induced 9h | 0.101 |
| SRR8749030 | Uninduced | 0.457 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 58.532 |
| SRR8400027 | Control - Root | 46.103 |