Gene detail information of Glyur004917s00047036 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20500.1 | 1.00E-04 | Glutaredoxin family protein |
| NR | XP_007138744.1 | 1.76E-13 | hypothetical protein PHAVU_009G233500g [Phaseolus vulgaris] |
| Swissprot | tr|Q8LFQ6|GRXC4_ARATH | 2.00E-07 | Glutaredoxin-C4 |
| trEMBL | tr|V7B1J6|V7B1J6_PHAVU | 7.00E-14 | Uncharacterized protein {ECO:0000313|EMBL:ESW10738.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04917 | 4112 | 5509 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 85.907 |
| SRR1783600 | control | 88.841 |
| SRR1783602 | moderate drought stress | 65.114 |
| SRR1811619 | moderate drought stress | 69.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.673 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.363 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.885 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.207 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 47.971 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.526 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.059 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 54.133 |
| SRR2868004 | Drought Stress (root) | 42.441 |
| SRR2967015 | Control (root) | 38.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.539 |
| SRR9715740 | Leaf | 31.617 |
| SRR9715741 | Leaf | 42.139 |
| SRR9715739 | Root | 32.092 |
| SRR9715742 | Root | 22.890 |
| SRR9715743 | Root | 22.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.569 |
| SRR8749028 | MeJA induced 9h | 27.266 |
| SRR8749029 | MeJA induced 9h | 38.622 |
| SRR8749030 | Uninduced | 8.975 |
| SRR8749031 | Uninduced | 9.220 |
| SRR8749032 | Uninduced | 14.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.656 |
| SRR8400027 | Control - Root | 32.422 |