Gene detail information of Glyur004883s00046033 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67920.1 | 4.00E-07 | |
| NR | KHN45262.1 | 1.44E-34 | hypothetical protein glysoja_041948 [Glycine soja] |
| trEMBL | tr|I1KJ78|I1KJ78_SOYBN | 5.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G11800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04883 | 7543 | 7764 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.079 |
| SRR1783600 | control | 1.184 |
| SRR1783602 | moderate drought stress | 1.201 |
| SRR1811619 | moderate drought stress | 1.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.563 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.436 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 65.980 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 71.632 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.456 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.668 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.597 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.272 |
| SRR2868004 | Drought Stress (root) | 30.446 |
| SRR2967015 | Control (root) | 23.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.809 |
| SRR9715740 | Leaf | 2.682 |
| SRR9715741 | Leaf | 5.594 |
| SRR9715739 | Root | 0.734 |
| SRR9715742 | Root | 0.423 |
| SRR9715743 | Root | 0.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.696 |
| SRR8749028 | MeJA induced 9h | 33.756 |
| SRR8749029 | MeJA induced 9h | 13.234 |
| SRR8749030 | Uninduced | 11.757 |
| SRR8749031 | Uninduced | 40.882 |
| SRR8749032 | Uninduced | 54.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.060 |
| SRR8400027 | Control - Root | 3.035 |