Gene detail information of Glyur004879s00045461 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004488505.1 | 1.65E-44 | PREDICTED: uncharacterized protein LOC101488681 [Cicer arietinum] |
| trEMBL | tr|A0A072TGZ8|A0A072TGZ8_MEDTR | 1.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:KEH16652.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04879 | 10025 | 11882 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004879s00045461.1 | PF03004.9 | Transposase_24 | 149 | 198 | 4.50E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.249 |
| SRR1783600 | control | 1.341 |
| SRR1783602 | moderate drought stress | 0.478 |
| SRR1811619 | moderate drought stress | 0.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.040 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.062 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.062 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.053 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.633 |
| SRR2868004 | Drought Stress (root) | 0.908 |
| SRR2967015 | Control (root) | 0.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.543 |
| SRR9715740 | Leaf | 7.879 |
| SRR9715741 | Leaf | 6.314 |
| SRR9715739 | Root | 0.716 |
| SRR9715742 | Root | 1.072 |
| SRR9715743 | Root | 0.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.389 |
| SRR8749028 | MeJA induced 9h | 2.346 |
| SRR8749029 | MeJA induced 9h | 2.886 |
| SRR8749030 | Uninduced | 1.673 |
| SRR8749031 | Uninduced | 2.468 |
| SRR8749032 | Uninduced | 2.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.744 |
| SRR8400027 | Control - Root | 8.401 |