Gene detail information of Glyur004868s00040082 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29170.1 | 5.00E-84 | Mnd1 family protein |
| NR | XP_003517991.1 | 5.93E-145 | PREDICTED: meiotic nuclear division protein 1 homolog [Glycine max] |
| Swissprot | tr|Q8GYD2|MND1_ARATH | 3.00E-122 | Meiotic nuclear division protein 1 homolog |
| trEMBL | tr|I1J4E4|I1J4E4_SOYBN | 2.00E-145 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G00780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04868 | 2993 | 4855 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004868s00040082.1 | PF03962.10 | Mnd1 | 15 | 204 | 6.10E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.159 |
| SRR1783600 | control | 1.220 |
| SRR1783602 | moderate drought stress | 0.983 |
| SRR1811619 | moderate drought stress | 1.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.483 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.437 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.832 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.666 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.834 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.901 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.310 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.996 |
| SRR2868004 | Drought Stress (root) | 3.051 |
| SRR2967015 | Control (root) | 2.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.372 |
| SRR9715740 | Leaf | 1.097 |
| SRR9715741 | Leaf | 0.353 |
| SRR9715739 | Root | 1.048 |
| SRR9715742 | Root | 0.677 |
| SRR9715743 | Root | 1.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.584 |
| SRR8749028 | MeJA induced 9h | 2.662 |
| SRR8749029 | MeJA induced 9h | 6.984 |
| SRR8749030 | Uninduced | 1.757 |
| SRR8749031 | Uninduced | 1.088 |
| SRR8749032 | Uninduced | 0.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.738 |
| SRR8400027 | Control - Root | 4.319 |