Gene detail information of Glyur004866s00041620 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH39943.1 | 1.49E-59 | DUF1639 family protein [Medicago truncatula] |
| trEMBL | tr|A0A072VEU0|A0A072VEU0_MEDTR | 6.00E-60 | DUF1639 family protein {ECO:0000313|EMBL:KEH39943.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04866 | 614 | 4000 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.538 |
| SRR1783600 | control | 23.238 |
| SRR1783602 | moderate drought stress | 15.958 |
| SRR1811619 | moderate drought stress | 14.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.752 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.236 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.867 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.751 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.996 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.567 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.971 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.878 |
| SRR2868004 | Drought Stress (root) | 26.509 |
| SRR2967015 | Control (root) | 28.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.962 |
| SRR9715740 | Leaf | 8.906 |
| SRR9715741 | Leaf | 10.482 |
| SRR9715739 | Root | 1.157 |
| SRR9715742 | Root | 5.861 |
| SRR9715743 | Root | 3.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.841 |
| SRR8749028 | MeJA induced 9h | 38.797 |
| SRR8749029 | MeJA induced 9h | 46.786 |
| SRR8749030 | Uninduced | 35.434 |
| SRR8749031 | Uninduced | 71.553 |
| SRR8749032 | Uninduced | 34.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.938 |
| SRR8400027 | Control - Root | 18.009 |