Gene detail information of Glyur004864s00047532 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20015.1 | 1.00E-81 | Eukaryotic aspartyl protease family protein |
| NR | AES60038.2 | 3.29E-144 | aspartic protease in GUARD CELL-like protein [Medicago truncatula] |
| Swissprot | tr|Q9LHE3|ASPG2_ARATH | 1.00E-117 | Protein ASPARTIC PROTEASE IN GUARD CELL 2 (Precursor) |
| trEMBL | tr|G7ICI5|G7ICI5_MEDTR | 1.00E-144 | Aspartic protease in GUARD CELL-like protein {ECO:0000313|EMBL:AES60038.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04864 | 520 | 1302 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur004864s00047532.1 | PF14543.1 | TAXi_N | 4 | 82 | 9.10E-15 |
| Glyur004864s00047532.1 | PF14541.1 | TAXi_C | 104 | 256 | 1.90E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.083 |
| SRR1783600 | control | 29.802 |
| SRR1783602 | moderate drought stress | 20.987 |
| SRR1811619 | moderate drought stress | 20.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.078 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.335 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.871 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.099 |
| SRR2868004 | Drought Stress (root) | 13.955 |
| SRR2967015 | Control (root) | 14.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.924 |
| SRR9715740 | Leaf | 0.760 |
| SRR9715741 | Leaf | 0.697 |
| SRR9715739 | Root | 78.780 |
| SRR9715742 | Root | 29.545 |
| SRR9715743 | Root | 35.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.688 |
| SRR8749028 | MeJA induced 9h | 3.389 |
| SRR8749029 | MeJA induced 9h | 3.628 |
| SRR8749030 | Uninduced | 1.137 |
| SRR8749031 | Uninduced | 0.058 |
| SRR8749032 | Uninduced | 1.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.518 |
| SRR8400027 | Control - Root | 48.240 |