Gene detail information of Glyur004862s00042759 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26090.1 | 5.00E-04 | NB-ARC domain-containing disease resistance protein |
| NR | KEH38509.1 | 0 | NBS-LRR type disease resistance protein [Medicago truncatula] |
| trEMBL | tr|A0A072V8Z2|A0A072V8Z2_MEDTR | 0 | NBS-LRR type disease resistance protein {ECO:0000313|EMBL:KEH38509.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04862 | 556 | 4411 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.070 |
| SRR1783600 | control | 3.092 |
| SRR1783602 | moderate drought stress | 7.821 |
| SRR1811619 | moderate drought stress | 7.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.004 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.079 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.400 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.464 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.858 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.142 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.691 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.240 |
| SRR2868004 | Drought Stress (root) | 20.045 |
| SRR2967015 | Control (root) | 19.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.025 |
| SRR9715740 | Leaf | 0.016 |
| SRR9715741 | Leaf | 0.908 |
| SRR9715739 | Root | 0.024 |
| SRR9715742 | Root | 1.083 |
| SRR9715743 | Root | 0.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.872 |
| SRR8749028 | MeJA induced 9h | 10.932 |
| SRR8749029 | MeJA induced 9h | 3.671 |
| SRR8749030 | Uninduced | 4.342 |
| SRR8749031 | Uninduced | 0.674 |
| SRR8749032 | Uninduced | 1.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.239 |
| SRR8400027 | Control - Root | 5.347 |