Gene detail information of Glyur004859s00040109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G08120.1 | 4.00E-29 | movement protein binding protein 2C |
| NR | KHN18385.1 | 9.86E-88 | hypothetical protein glysoja_006798 [Glycine soja] |
| trEMBL | tr|K7KNF1|K7KNF1_SOYBN | 2.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G07440.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04859 | 2035 | 3111 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.570 |
| SRR1783600 | control | 2.662 |
| SRR1783602 | moderate drought stress | 7.879 |
| SRR1811619 | moderate drought stress | 7.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.296 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.796 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.847 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.587 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.764 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.900 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.769 |
| SRR2868004 | Drought Stress (root) | 1.532 |
| SRR2967015 | Control (root) | 1.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.057 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.661 |
| SRR8749028 | MeJA induced 9h | 1.760 |
| SRR8749029 | MeJA induced 9h | 0.835 |
| SRR8749030 | Uninduced | 1.120 |
| SRR8749031 | Uninduced | 0.566 |
| SRR8749032 | Uninduced | 0.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.240 |
| SRR8400027 | Control - Root | 1.169 |