Gene detail information of Glyur004842s00039904 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001235181.1 | 1.84E-11 | uncharacterized protein LOC100305679 [Glycine max] |
| trEMBL | tr|C6SW65|C6SW65_SOYBN | 7.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G46470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold04842 | 82 | 3586 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.037 |
| SRR1783600 | control | 47.585 |
| SRR1783602 | moderate drought stress | 63.011 |
| SRR1811619 | moderate drought stress | 62.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 77.931 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 82.068 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.838 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.754 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.189 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 53.745 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.583 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.959 |
| SRR2868004 | Drought Stress (root) | 28.982 |
| SRR2967015 | Control (root) | 29.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.407 |
| SRR9715740 | Leaf | 2.452 |
| SRR9715741 | Leaf | 2.391 |
| SRR9715739 | Root | 2.526 |
| SRR9715742 | Root | 7.463 |
| SRR9715743 | Root | 4.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.314 |
| SRR8749028 | MeJA induced 9h | 8.099 |
| SRR8749029 | MeJA induced 9h | 4.952 |
| SRR8749030 | Uninduced | 6.799 |
| SRR8749031 | Uninduced | 1.754 |
| SRR8749032 | Uninduced | 2.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.818 |
| SRR8400027 | Control - Root | 35.740 |